BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034G01SP1|AL429943
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1116 1484 0.0
>3x_Contig1116
Length = 5699
Score = 1484 bits (733), Expect = 0.0
Identities = 773/803 (96%)
Strand = Plus / Plus
Query: 1 tatttttaaagaagaacaataggataatggwaataaaggcaaaagcaaaagctgtccaga 60
||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 239 tatttttaacgaagaacaataggatcatggtaataaaggccaaagcaaaagctgtccaga 298
Query: 61 mcatacmatagtatgcactgcmgcmtctgtgaacgamgttgtaammatctgcagcagtac 120
||||| |||||||||||||| || ||||||||||| ||||||| ||||||||||||||
Sbjct: 299 ccataccatagtatgcactgccgcctctgtgaacgacgttgtaaccatctgcagcagtac 358
Query: 121 cttcmttgatgatttgagtaamgamaacagagatgatggcmcccaatamagagaatagag 180
|||| |||||||||||||||| || ||||||||||||||| ||||||| |||||||||||
Sbjct: 359 cttccttgatgatttgagtaacgacaacagagatgatggcccccaatacagagaatagag 418
Query: 181 caaggcacatagcmaaaamtcttgcaaaccatctagtaattttaccagtaaamatgtaga 240
||||||||||||| |||| |||||||||||||||||||||||||||||| || |||||||
Sbjct: 419 caaggcacatagccaaaactcttgcaaaccatctagtaattttaccagtcaacatgtaga 478
Query: 241 agaaggatagtatgawggcaatgagtaagaagaaagcgatgatgatagaaaacaaattca 300
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 479 agaaggatagtatgatggcaatgagtaagaagaaagcgatgatgatagacaacaaattca 538
Query: 301 aagcmaagamtgctttaamggctggcttatactcatgcwctctgtctggtaacttacmga 360
|||| |||| |||||||| ||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 539 aagccaagactgctttaacggctggcttatactcatgctctctgtctggtaacttaccga 598
Query: 361 ccaagatgatgtcgtccttggagatgttcaatgcttgcaagtaaggtctgaagtctgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ccaagatgatgtcgtccttggagatgttcaatgcttgcaagtaaggtctgaagtctgagt 658
Query: 421 wctccaattcagtgtacaaaawctccttcatatccaagccttgaacggcgtgtgggttgg 480
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 659 tctccaattcagtgtacaaaatctccttcatatccaagccttgaacggcgtgtgggttgg 718
Query: 481 aacaagataagamatcgccatcagaagagacacggcagtacgagaagatccctaatctga 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aacaagataagacatcgccatcagaagagacacggcagtacgagaagatccctaatctga 778
Query: 541 aacgttcagcgatgttcaaataagataagatatctggcatgatttcattgatatcatctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aacgttcagcgatgttcaaataagataagatatctggcatgatttcattgatatcatctt 838
Query: 601 cggtgattacttcttcagaggagccagcagcctgtagtaatcccaagattggggtgaaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 cggtgattacttcttcagaggagccagcagcctgtagtaatcccaagattggggtgaaca 898
Query: 661 aggttgggttagattgtgcaatagctgtcaattccatcaacgccttgaaagagccagtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 899 aggttgggttagattgtgcaatagctgtcaattccatcaacgccttgaaagagccagtag 958
Query: 721 gttcagaagaagcgtgaagcaaagagaataatgcatccatttgctcttgtttttcggtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959 gttcagaagaagcgtgaagcaaagagaataatgcatccatttgctcttgtttttcggtag 1018
Query: 781 tactttgcgacaaagaggtttgc 803
|||||||||||||||||||||||
Sbjct: 1019 tactttgcgacaaagaggtttgc 1041
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4776
Number of Sequences: 1807
Number of extensions: 4776
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)